Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 33
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

53 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     5.9    153        0    4.9
Qui1     Qui     0.0     23        0    1.6
Qui2     Qui     0.0     14        0    2.2
Qui3     Qui     8.1    111        0    3.4
Qui4     Qui    19.0     58        0    2.4
Rio1     Rio    49.0     51        0    2.5
Rio2     Rio    17.6     51        0    2.8
Rio3     Rio    26.9     26        0    1.9
Rio4     Rio    49.2     61        0    3.0