Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 28
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

28 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0      1        0    2.9
Qui1     Qui     0.0     45        0    6.1
Qui2     Qui     7.0     43        0    5.7
Qui3     Qui     0.0     60        0    8.0
Qui4     Qui    16.4    116        0    9.2
Rio1     Rio    79.8     94        0    9.7
Rio2     Rio    38.6     70        0    6.7
Rio3     Rio    84.4     96        0    7.1
Rio4     Rio    63.5     85        0    8.1