Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 38
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

15 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    10.2    127        0   12.9
Qui1     Qui    50.0     40        0    4.1
Qui2     Qui    54.0     50        0    5.0
Qui3     Qui    35.1     37        0    3.3
Qui4     Qui    42.9     28        0    3.3
Rio1     Rio    20.4     93        0    7.4
Rio2     Rio    18.7     91        0    7.5
Rio3     Rio    26.2    103        0   10.1
Rio4     Rio    19.4     67        0    7.9