Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 29
  seen in >= 2 oysters: 7
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 1  [CpG-destroying: 0]
    70581665 A>G  Pum=0.5  Qui=0.714  Rio=0.075

18 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    75.0     40        0    5.1
Qui1     Qui    63.6     22        0    5.3
Qui2     Qui    64.3     42        0    8.1
Qui3     Qui    70.0     20        0    5.7
Qui4     Qui    80.0     10        0    3.8
Rio1     Rio    90.1     71        0    8.6
Rio2     Rio    93.3     60        0    8.3
Rio3     Rio    90.7     75        0    8.1
Rio4     Rio    93.7     79        0    7.7