Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

20 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    89.1     46        0    8.4
Qui1     Qui    52.1     71        0    8.0
Qui2     Qui    74.4     86        0    6.5
Qui3     Qui    41.3     46        0    6.5
Qui4     Qui    14.0     57        0    5.4
Rio1     Rio    91.4     93        0    9.1
Rio2     Rio    93.6    140        0   11.6
Rio3     Rio    90.0    130        0    9.2
Rio4     Rio    90.6     53        0    7.8