Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 39
  seen in >= 2 oysters: 9
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    39.1    174        0   10.5
Qui1     Qui     0.0    122        0    7.8
Qui2     Qui    17.5    126        0    7.8
Qui3     Qui    14.8     61        0    5.1
Qui4     Qui     0.0     94        0    6.1
Rio1     Rio    50.0    164        0   10.7
Rio2     Rio    48.3     87        1    7.8
Rio3     Rio    46.9     81        1    6.6
Rio4     Rio    38.3    120        0    9.6