Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 36
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    39.7     68        0    4.8
Qui1     Qui    17.0     53        0    4.8
Qui2     Qui     2.9     34        0    3.6
Qui3     Qui    15.4     78        0    5.1
Qui4     Qui    13.7     51        0    3.1
Rio1     Rio    52.7     55        0    5.4
Rio2     Rio    54.2     48        0    4.0
Rio3     Rio    51.1     45        0    3.4
Rio4     Rio    44.1     34        0    4.3