Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 10
  seen in >= 2 oysters: 5
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

11 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    86.7     30        0    8.1
Qui1     Qui    46.9     98        0   15.5
Qui2     Qui    40.2     82        0   15.4
Qui3     Qui    45.7     81        0   15.6
Qui4     Qui    41.4     70        0   14.3
Rio1     Rio    83.7     49        0   10.2
Rio2     Rio    81.5     27        0   10.0
Rio3     Rio    95.5     22        0    8.0
Rio4     Rio    94.3     35        0    9.3