Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

27 CpGs in target; 12 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    20.0    260        0   15.9
Qui1     Qui    55.2    163        0   12.3
Qui2     Qui    29.6    247        0   12.0
Qui3     Qui    24.7    251        0   15.4
Qui4     Qui     5.6     90        0    6.9
Rio1     Rio     2.1    286        0   12.5
Rio2     Rio     3.1    194        0   11.6
Rio3     Rio     5.9    152        1    8.7
Rio4     Rio     2.6    227        1   12.3