Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 19
  seen in >= 2 oysters: 5
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target; 10 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    23.4    141        0   19.1
Qui1     Qui    31.6     95        0   14.1
Qui2     Qui    21.5     93        0   21.4
Qui3     Qui    21.4    112        0   20.8
Qui4     Qui    30.1     83        0   12.5
Rio1     Rio     5.9    119        0   18.5
Rio2     Rio     0.0     67        0   16.3
Rio3     Rio    10.2     88        0   11.9
Rio4     Rio     2.1     94        0   15.4