Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 319
  seen in >= 2 oysters: 38
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

147 CpGs in target; 82 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    36.1   1027        0   12.1
Qui1     Qui    60.8    789        0   10.0
Qui2     Qui    35.7    827        0   10.6
Qui3     Qui    32.6   1077        0   13.5
Qui4     Qui    38.2    709        0    8.3
Rio1     Rio     2.8    971        1   10.8
Rio2     Rio     2.1    807        0    9.5
Rio3     Rio     4.7    699        2    7.9
Rio4     Rio     4.7    875        1   10.5