Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

29 CpGs in target; 6 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    50.7     71        0    6.1
Qui1     Qui    88.1    109        0    6.8
Qui2     Qui    59.6     89        0    6.5
Qui3     Qui    63.5     74        0    6.4
Qui4     Qui    72.6    117        0    6.8
Rio1     Rio     3.1     96        0    4.4
Rio2     Rio     5.0     60        0    4.9
Rio3     Rio     2.0    100        0    5.2
Rio4     Rio     5.1    117        0    7.4