Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 7
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

29 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     87        0    5.4
Qui1     Qui     2.4     84        0    6.9
Qui2     Qui    39.2     97        0    7.3
Qui3     Qui    41.7    132        0    6.1
Qui4     Qui    36.7    109        0    5.3
Rio1     Rio     1.0     97        0    5.2
Rio2     Rio     6.8    132        0    7.0
Rio3     Rio     0.0    110        0    4.4
Rio4     Rio     0.0    114        0    7.2