Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum              0        0   10.6
Qui1     Qui              0        0    6.3
Qui2     Qui              0        0    8.6
Qui3     Qui              0        0    9.4
Qui4     Qui              0        0    6.6
Rio1     Rio              0        0    8.9
Rio2     Rio   100.0      7        0    9.7
Rio3     Rio              0        0    8.0
Rio4     Rio              0        0    9.6