Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 34
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

21 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     22        0    2.5
Qui1     Qui    52.1     71        0    5.8
Qui2     Qui    30.2     96        0    8.5
Qui3     Qui    43.5     85        0    7.4
Qui4     Qui    34.9     63        0    4.9
Rio1     Rio     1.5     67        0    5.3
Rio2     Rio     3.2     62        0    5.7
Rio3     Rio    59.5     42        0    4.0
Rio4     Rio     0.0    103        0    7.0