Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 44
  seen in >= 2 oysters: 18
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target; 17 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    15.3     98        0    9.9
Qui1     Qui     3.8    160        0    9.9
Qui2     Qui     0.9    113        0   10.2
Qui3     Qui     3.0    167        0   12.5
Qui4     Qui     3.2    125        0    9.4
Rio1     Rio    58.7    143        0   14.6
Rio2     Rio    30.8     91        0    8.1
Rio3     Rio    37.3    126        0    8.8
Rio4     Rio    30.8    104        0    8.3