Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 19
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    80.0     25        0    7.0
Qui1     Qui    55.6     27        0    6.4
Qui2     Qui    72.7     22        0    5.1
Qui3     Qui    81.8     22        0    8.6
Qui4     Qui    94.7     19        0    7.7
Rio1     Rio    55.0     40        0    8.0
Rio2     Rio    70.0     20        0    6.2
Rio3     Rio    50.0     12        0    6.7
Rio4     Rio    58.1     43        0    7.6