Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 51
  seen in >= 2 oysters: 6
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

34 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     6.7    299        0    8.5
Qui1     Qui     4.8    104        0    4.1
Qui2     Qui     2.0    293        0    8.9
Qui3     Qui     3.1    127        0    3.9
Qui4     Qui     4.2     96        0    3.6
Rio1     Rio    22.6    429        0   13.1
Rio2     Rio    37.0    227        0    7.4
Rio3     Rio    29.6    274        0    9.8
Rio4     Rio    26.2    305        0    8.4