Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 34
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

24 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    98.2     57        0    4.1
Qui1     Qui    56.2     64        0    4.9
Qui2     Qui    60.3     73        0    4.4
Qui3     Qui    61.5     78        0    4.5
Qui4     Qui    69.0     71        0    5.5
Rio1     Rio   100.0     44        0    4.2
Rio2     Rio   100.0     56        0    7.9
Rio3     Rio    97.0     33        0    3.1
Rio4     Rio    93.3     75        0    5.5