Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 36
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 18 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    87.5     88        0    9.9
Qui1     Qui    35.8     95        0    7.9
Qui2     Qui    43.9     57        0    5.5
Qui3     Qui    33.0    103        0    8.7
Qui4     Qui    36.7     49        0    5.7
Rio1     Rio    89.2    130        0   10.1
Rio2     Rio    86.4     81        0    8.8
Rio3     Rio    81.9     83        0    9.2
Rio4     Rio    91.3    127        0   13.0