Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 2
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum   100.0      2        0    7.0
Qui1     Qui    50.0      4        0   13.0
Qui2     Qui    50.0      2        0   14.0
Qui3     Qui    28.6      7        0   15.5
Qui4     Qui   100.0      2        0   11.0
Rio1     Rio    80.0      5        0   13.0
Rio2     Rio   100.0      2        0    7.0
Rio3     Rio    66.7      3        0   12.5
Rio4     Rio   100.0      5        0   10.0