Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    84.6     91        0    4.8
Qui1     Qui    24.7     93        0    5.2
Qui2     Qui    42.9    175        0    8.1
Qui3     Qui     1.0    103        0    5.5
Qui4     Qui    29.5     61        0    2.9
Rio1     Rio    80.4    138        0    6.6
Rio2     Rio    87.6     97        0    5.7
Rio3     Rio    87.8    156        0    6.7
Rio4     Rio    91.3    150        0    7.2