Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 16
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

28 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    88.2    255        0    8.8
Qui1     Qui    38.3    167        0    6.5
Qui2     Qui     4.3    186        0    7.1
Qui3     Qui     0.5    216        0    7.2
Qui4     Qui     0.0     99        0    4.4
Rio1     Rio    90.8    360        0   12.4
Rio2     Rio    95.9    170        0    7.0
Rio3     Rio    91.8    231        0    8.5
Rio4     Rio    92.4    211        0    7.2