Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 33
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 16 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    12.3     65        0    5.0
Qui1     Qui    57.4     68        0    7.0
Qui2     Qui     2.2     90        0    4.5
Qui3     Qui    58.3    103        0    6.4
Qui4     Qui    54.8    135        0    7.9
Rio1     Rio     3.4    117        0    9.1
Rio2     Rio     3.5     86        0    5.7
Rio3     Rio    10.4     48        0    4.0
Rio4     Rio     1.2     80        0    6.8