Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 2
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     12        0   12.0
Qui1     Qui     0.0      6        0    6.0
Qui2     Qui     0.0     10        0   10.0
Qui3     Qui     0.0     24        0   24.0
Qui4     Qui     0.0      4        0    4.0
Rio1     Rio    30.8     13        0   13.0
Rio2     Rio    20.0      5        0    5.0
Rio3     Rio    53.3     15        0   16.0
Rio4     Rio    14.3     14        0   15.0