Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 19
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

11 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    56.4     55        0    8.1
Qui1     Qui    61.9     42        0    7.6
Qui2     Qui    68.9     74        0   10.1
Qui3     Qui    58.7     63        0   10.8
Qui4     Qui    48.3     58        0    7.3
Rio1     Rio    74.0     73        0    9.6
Rio2     Rio    71.4     63        0    7.1
Rio3     Rio    81.0     58        0    9.0
Rio4     Rio    73.4     64        0    8.8