Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

27 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     3.7    108        0    9.2
Qui1     Qui     2.9     70        0    5.3
Qui2     Qui     0.0     75        0    5.9
Qui3     Qui     0.0     96        0    7.8
Qui4     Qui     1.7     60        0    6.1
Rio1     Rio    16.5     91        0    8.2
Rio2     Rio    43.4     53        0    7.1
Rio3     Rio    52.7     74        0    7.1
Rio4     Rio    71.8    131        0    9.9