Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 21
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 11 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     56        0    4.5
Qui1     Qui    64.5     62        0    5.8
Qui2     Qui     0.0     54        0    5.6
Qui3     Qui    81.0     42        0    6.0
Qui4     Qui    93.1     72        0    6.9
Rio1     Rio     5.4     56        0    5.2
Rio2     Rio     0.0     30        0    4.9
Rio3     Rio     0.0     41        0    8.0
Rio4     Rio     0.0     59        0    7.3