Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 30
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

13 CpGs in target; 3 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     29        0    2.7
Qui1     Qui    94.0     50        0    4.9
Qui2     Qui    90.6     85        0    7.3
Qui3     Qui    90.3     93        0    9.3
Qui4     Qui    93.8     65        0    5.4
Rio1     Rio    54.7     64        0    5.8
Rio2     Rio    86.2     58        0    5.2
Rio3     Rio    72.7     77        0    6.2
Rio4     Rio    78.7     94        0    7.3