Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 32
  seen in >= 2 oysters: 21
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    19.2     52        1    7.9
Qui1     Qui    20.4     54        1   14.2
Qui2     Qui    40.4     52        2   11.4
Qui3     Qui     0.0     28        2   11.6
Qui4     Qui    34.4     32        1    8.7
Rio1     Rio     2.9     35        2   10.0
Rio2     Rio     0.0     43        0   11.5
Rio3     Rio     0.0     25        2    7.7
Rio4     Rio    14.0     43        1   12.6