Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 30
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

8 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     9.8     41        0   11.7
Qui1     Qui     3.6     28        0    8.9
Qui2     Qui    61.1     90        0   16.3
Qui3     Qui    82.9     41        0   13.0
Qui4     Qui    47.6     42        0    8.1
Rio1     Rio     0.0     36        0   11.8
Rio2     Rio     4.7     43        0    9.5
Rio3     Rio     0.0     44        0    9.6
Rio4     Rio     5.1     39        0   11.0