Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 18
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

26 CpGs in target; 10 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     4.7     43        0    7.3
Qui1     Qui     5.2     58        0    4.6
Qui2     Qui    82.1     67        0    8.8
Qui3     Qui    87.1    116        1    9.6
Qui4     Qui    56.7     67        0    6.9
Rio1     Rio     2.9    105        0    8.9
Rio2     Rio     4.3     70        0    6.7
Rio3     Rio     6.3     63        0    5.7
Rio4     Rio     0.0     80        0    9.0