Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 35
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     4.5     22        0    4.0
Qui1     Qui     0.0     43        0    4.7
Qui2     Qui    62.5     48        0    6.1
Qui3     Qui    96.2     52        0    9.7
Qui4     Qui    71.1     38        0    4.5
Rio1     Rio     2.2     46        0    6.9
Rio2     Rio     6.4     47        0    6.2
Rio3     Rio     6.7     15        0    3.7
Rio4     Rio     0.0     24        0    6.3