Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 8
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    30.3     33        0   39.0
Qui1     Qui    64.3     14        0   16.0
Qui2     Qui    86.7     15        0   20.0
Qui3     Qui    47.1     17        0   26.5
Qui4     Qui    60.0     10        0   12.0
Rio1     Rio     3.6     55        1   58.0
Rio2     Rio    26.9     26        0   35.5
Rio3     Rio    25.0     16        0   18.5
Rio4     Rio    36.0     25        0   32.0