Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 14
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

8 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     7.1     85        0    9.4
Qui1     Qui    72.7     44        0    5.8
Qui2     Qui    42.2     83        0    9.8
Qui3     Qui    77.4     53        0    7.6
Qui4     Qui    63.0     54        0    7.1
Rio1     Rio    26.1     69        0   10.4
Rio2     Rio     3.1     64        0    8.4
Rio3     Rio    10.9     46        0    7.4
Rio4     Rio     3.8     79        0    9.0