Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    57.5     73        0    7.8
Qui1     Qui    33.3     33        0    5.7
Qui2     Qui    10.8     65        0    8.2
Qui3     Qui    30.0     40        0    6.6
Qui4     Qui    27.8     72        0    7.8
Rio1     Rio    56.2     89        0   11.4
Rio2     Rio    37.7     69        0   10.9
Rio3     Rio    53.2     47        0    7.4
Rio4     Rio    43.2     44        0    8.2