Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 23
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     1.8     55        0    6.2
Qui1     Qui     0.0     63        0    4.8
Qui2     Qui     0.0     50        0    5.2
Qui3     Qui     4.6     65        0    5.2
Qui4     Qui     3.1     64        0    5.1
Rio1     Rio    22.9     70        0    6.7
Rio2     Rio     0.0     50        0    4.5
Rio3     Rio     3.3     30        0    3.6
Rio4     Rio    25.0     84        0    7.2