Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 38
  seen in >= 2 oysters: 10
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

26 CpGs in target; 18 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    15.5     84        0    5.1
Qui1     Qui    34.5    145        0    9.3
Qui2     Qui    19.7    122        0    8.8
Qui3     Qui    15.9    170        0   11.5
Qui4     Qui     1.5     65        0    4.7
Rio1     Rio     3.2     62        0    4.8
Rio2     Rio     0.9    114        0    7.1
Rio3     Rio     6.8     73        0    4.5
Rio4     Rio     0.0    134        0   10.8