Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     6.8    117        0    7.5
Qui1     Qui    87.0     54        0    6.3
Qui2     Qui    90.8     76        0    6.3
Qui3     Qui    83.2    113        0    9.3
Qui4     Qui    80.2     86        0    7.5
Rio1     Rio    41.4     70        0    4.9
Rio2     Rio    48.8     86        0    7.7
Rio3     Rio    32.4    102        0    7.5
Rio4     Rio    27.4     84        0    7.0