Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 33
  seen in >= 2 oysters: 7
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

16 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    36.1    147        1   14.4
Qui1     Qui    69.2     65        1    3.5
Qui2     Qui    77.0     74        0    3.9
Qui3     Qui    75.5    102        0    5.8
Qui4     Qui    66.1     56        0    3.0
Rio1     Rio    48.2    139        1    9.7
Rio2     Rio    45.7     94        0    7.7
Rio3     Rio    50.9    110        1    9.7
Rio4     Rio    61.3     75        1    6.2