Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

16 CpGs in target; 14 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     73        0    9.6
Qui1     Qui    77.5     40        0   10.7
Qui2     Qui    76.7     60        0   10.8
Qui3     Qui    20.5    112        0   12.8
Qui4     Qui              0        0    0.3
Rio1     Rio     0.0     42        0   13.1
Rio2     Rio     2.6     39        0   10.6
Rio3     Rio     0.0     43        0    8.3
Rio4     Rio     0.0    117        0   14.9