Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

26 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     70        0    4.1
Qui1     Qui    35.1     94        0    5.8
Qui2     Qui    42.9     91        0    5.5
Qui3     Qui    45.1    122        0    7.7
Qui4     Qui              0        0    0.0
Rio1     Rio     0.0     62        0    5.2
Rio2     Rio     3.0     67        0    4.9
Rio3     Rio     3.3     90        0    4.4
Rio4     Rio     1.6     63        0    4.3