Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

35 CpGs in target; 23 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     1.0    102        0    9.4
Qui1     Qui    12.4    178        0   14.2
Qui2     Qui    59.5     84        0    7.3
Qui3     Qui    52.9    136        0    8.3
Qui4     Qui    45.5    121        0   11.7
Rio1     Rio     0.0    130        0    7.1
Rio2     Rio     1.0     99        0    6.3
Rio3     Rio    80.0     25        0    2.5
Rio4     Rio     0.0    100        0    9.0