Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 17
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

24 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    50.0     62        0    6.9
Qui1     Qui    37.1     70        0    7.5
Qui2     Qui    50.0     62        0    5.8
Qui3     Qui    21.4     28        0    7.2
Qui4     Qui    38.7     31        0    5.8
Rio1     Rio    66.7     21        0    4.9
Rio2     Rio    77.4     31        0    5.0
Rio3     Rio    64.3     28        0    5.8
Rio4     Rio    56.5     46        0    6.3