Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 29
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

9 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    76.3     59        0    7.6
Qui1     Qui    30.8     78        0   10.7
Qui2     Qui    48.4     93        0   12.2
Qui3     Qui    19.5    123        0   14.1
Qui4     Qui    36.5     96        0    9.7
Rio1     Rio    64.4     59        0    9.8
Rio2     Rio    51.6     64        0   10.7
Rio3     Rio    66.0     47        0    8.8
Rio4     Rio    75.0     60        0   10.9