Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 43
  seen in >= 2 oysters: 13
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

11 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    26.2    619        0   37.7
Qui1     Qui    40.9    154        0    8.6
Qui2     Qui    35.2    216        0   12.5
Qui3     Qui    65.1     83        0    5.6
Qui4     Qui    24.7     77        0    4.3
Rio1     Rio    13.1    198        0   11.0
Rio2     Rio    15.8    266        0   16.5
Rio3     Rio     1.2     83        0    4.0
Rio4     Rio    24.8    238        0   18.1