Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 83
  seen in >= 2 oysters: 19
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

12 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    33.3     39        0    6.9
Qui1     Qui    41.8     55        0   12.0
Qui2     Qui    29.6     27        0    4.1
Qui3     Qui    41.9     31        0    5.1
Qui4     Qui    30.6     36        0    7.2
Rio1     Rio    24.1     29        0    6.2
Rio2     Rio    17.1     41        0    9.3
Rio3     Rio    30.2     43        1    5.3
Rio4     Rio    21.7     46        0    7.1