Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 25
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

44 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    46.1     89        0    4.2
Qui1     Qui     0.0      9        0    1.9
Qui2     Qui     4.8     21        0    3.0
Qui3     Qui     0.0     25        0    1.4
Qui4     Qui    24.5     49        0    3.5
Rio1     Rio     0.0     45        0    2.7
Rio2     Rio     0.0     68        0    3.6
Rio3     Rio     0.0     36        0    2.7
Rio4     Rio     0.0     27        0    1.5