Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 21
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    50.0     22        0    2.3
Qui1     Qui    40.0     40        0    3.1
Qui2     Qui    47.9     96        0    7.0
Qui3     Qui    43.8     73        0    8.3
Qui4     Qui    38.6     44        0    4.1
Rio1     Rio    20.4     54        0    6.2
Rio2     Rio    51.7     29        0    2.4
Rio3     Rio     0.0     30        0    3.5
Rio4     Rio    22.8     57        0    4.7