Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 25
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

15 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    90.6     64        0    7.6
Qui1     Qui   100.0     15        0    5.8
Qui2     Qui    61.3    106        0    7.9
Qui3     Qui    51.4     70        0    8.0
Qui4     Qui    41.9     31        0    5.5
Rio1     Rio    74.0    100        0    9.1
Rio2     Rio    94.7     57        0    6.3
Rio3     Rio    69.4     49        0    8.3
Rio4     Rio    85.4    103        0    9.1